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X-ray Structures

Important note for CSGID staff! Before depositing your structure, make sure it follows the guidelines here " PDB deposit guidelines" and here "Crystal structure quality metrics for PDB deposition."

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Page 1 of 35, showing 20 records  out of 688 total, starting on record 1 structures.
Click on the title of a structure below to see more information about that structure.

Target IDP92645          community request

Title: 1.28 Angstrom resolution crystal structure of predicted acyltransferase with acyl-CoA N-acyltransferase domain (ypeA) from Escherichia coli str. K-12 substr. MG1655
Authors: Halavaty, A.S. Filippova, E.V. Minasov, G. Flores, K.J. Dubrovska, I. Shuvalova, L. Anderson, W.F. Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 4QUS (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: phosphate ion
Other ligands:
R: 11.1%
Rfree: 13.9%
Resolution: 1.28Å
Deposited: 2014-07-11
Released: 2014-07-23

Target IDP92622          community request

Title: Co-crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase from Cryptosporidium parvum with a Inhibitor N109
Authors: Kim, Y., Makowska-Grzyska, M., Maltseva, N., Gu, M., Sun,Z., Zhang, M., Cho, J.H., Khan, J., Suebsuwong, C., Vo, P., Hedstrom, L., Cuny, G., Andesrson, W.F. Joachimiak, A., CSGID
PDB 4QJ1 (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: inosine 5''-phosphate, unknown
Other ligands: , ,
R: 20.5%
Rfree: 25.7%
Resolution: 2.42Å
Deposited: 2014-06-10
Released:

Target IDP90544          community request

Title: Crystal structure of dihydrofolate reductase from Yersinia pestis complexed with methotrexate
Authors: N.Maltseva, Y.Kim, M.Makowska-Grzyska, R.Mulligan, S.Shatsman, W.F.Anderson, A.Joachimiak, Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 4QI9 (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with:
R: 19.3%
Rfree: 23.6%
Resolution: 2.3Å
Deposited: 2014-06-02
Released: 2014-07-02

Target IDP93954          community request

Title: Structure of West Nile Virus NS1 (176-352) with the protective 22NS1 antibody Fab.
Authors: Melissa A. Edeling, Daved H. Fremont
PDB 4OII (PDBSUM) (Profunc) (GPSS) (MMDB)
R: 21.6%
Rfree: 26.5%
Resolution: 3Å
Deposited: 2014-02-23
Released:

Target IDP90246          community request

Title: Crystal structure of the catalytic domain of DapE protein from V.cholerea in the Zn bound form
Authors: B.Nocek,M.Makowska-Grzyska,M.Gu,R.Jedrzejczak,W.F.Anderson,A.Joachimiak,Center For Structural Genomics Of Infectious Diseases (Csgid)
PDB 4OP4 (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with:
Other ligands: , ,
R: 15.5%
Rfree: 18.2%
Resolution: 1.65Å
Deposited: 2014-01-29
Released: 2014-04-23
Title: The Crystal structure of the apo-catalytic domain of DapE protein from V.cholerea
Authors: B.Nocek,M.Makowska-Grzyska,M.Gu,R.Jedrzejczak,W.F.Anderson,A.Joachimiak,Center For Structural Genomics Of Infectious Diseases (Csgid)
PDB 4ONW (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands: , , ,
R: 15.7%
Rfree: 18%
Resolution: 1.65Å
Deposited: 2014-01-29
Released: 2014-04-23

Target IDP91216          community request

Title: Crystal Structure of a Putative Macrophage Growth Locus, subunit A From Francisella tularensis SCHU S4
Authors: Brunzelle, J.S. Wawrzak, Z. Skarina, T. Savchenko, A. Anderson, W.F. Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 4OMV (PDBSUM) (Profunc) (GPSS) (MMDB)
R: 19%
Rfree: 22.5%
Resolution: 2.75Å
Deposited: 2014-01-27
Released: 2014-01-27

Target IDP91975          community request

Title: Crystal structure of an ABC uptake transporter substrate binding protein from Streptococcus pneumoniae with Bound Histidine
Authors: J.S.BRUNZELLE,W.WAWRZAK,Y.YIM,M.KUDRITSKA,A.SAVCHENKO,W.F.ANDERSON, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES (CSGID)
PDB 4OHN (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands:
R: 13.8%
Rfree: 15.3%
Resolution: 1.37Å
Deposited: 2014-01-21
Released: 2014-01-21

Target IDP91947          community request

Title: Crystal structure of the second substrate binding domain of a putative amino acid ABC transporter from Streptococcus pneumoniae Canada MDR_19A
Authors: Stogios PJ, Wawrzak Z, Kudritska M, Yim V, Savchenko A, Anderson WF, Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 4OEN (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands: , , chloride ion
R: 16.3%
Rfree: 19.6%
Resolution: 1.65Å
Deposited: 2014-01-13
Released: 2014-01-22

Target IDP92076          community request

Title: 2.6 Angstrom Crystal Structure of Putative Phosphoglycerate Mutase 1 from Toxoplasma gondii.
Authors: Minasov, G., Ruan, J., Ngo, H., Shuvalova, L., Dubrovska, I., Flores, K., Shanmugam, D., Roos, D., Anderson, W.F., Center for Structural Genomics of Infectious Diseases.
PDB 4ODI (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands:
R: 19.9%
Rfree: 23.9%
Resolution: 2.6Å
Deposited: 2014-01-10
Released: 2014-01-22

Target IDP90854          community request

Title: 2.35 Angstrom resolution crystal structure of putative O-acetylhomoserine (thiol)-lyase (metY) from Campylobacter jejuni subsp. jejuni NCTC 11168 with N''-Pyridoxyl-Lysine-5''-Monophosphate at position 205
Authors: Halavaty, A.S. Brunzelle, J.S. Wawrzak, Z. Onopriyenko, O. Savchenko, A. Anderson, W.F. Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 4OC9 (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: 2-lysine(3-hydroxy-2-methyl-5-phosphonooxymethyl-pyridi n-4-ylmethane)
Other ligands: , imidazole, phosphate ion
R: 20.5%
Rfree: 24.9%
Resolution: 2.35Å
Deposited: 2014-01-08
Released:

Target IDP91778          community request

Title: Crystal structure of vancomycin resistance D,D-dipeptidase/D,D-pentapeptidase VanXYc D59S mutant in complex with D-Alanine-D-Alanine and Copper (II)
Authors: Stogios PJ, Evdokimova E, Meziane-Cherif D, Di Leo R, Yim V, Courvalin P, Savchenko A, Anderson WF, Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 4OAK (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with:
Other ligands: , , , , chloride ion
R: 19.1%
Rfree: 23.5%
Resolution: 2Å
Deposited: 2014-01-08
Released: 2014-01-15

Target IDP91568          community request

Title: 2.60 Angstrom resolution crystal structure of a protein kinase domain of type III effector NleH2 (ECs1814) from Escherichia coli O157:H7 str. Sakai
Authors: Anderson, S.M. Halavaty, A.S. Wawrzak, Z. Kydrinska, M. Skarina, T. Yim, V. Savchenko, A. Anderson, W.F. Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 4O96 (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands: ,
R: 21%
Rfree: 25.3%
Resolution: 2.6Å
Deposited: 2014-01-01
Released: 2014-01-15

Target IDP92725          community request

Title: CRYSTAL STRUCTURE OF MONO-ZINC FORM OF SUCCINYL DIAMINOPIMELATE DESUCCINYLASE FROM NEISSERIA MENINGITIDIS MC58
Authors: B.NOCEK, R.HOLZ, W.F.ANDERSON, A.JOACHIMIAK
PDB 4O23 (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with:
Other ligands:
R: 21.3%
Rfree: 24.1%
Resolution: 2.09Å
Deposited: 2013-12-16
Released: 2014-02-25

Target IDP92074          community request

Title: 2.4 Angstrom Resolution Crystal Structure of Putative Nucleoside Diphosphate Kinase from Toxoplasma gondii.
Authors: G.Minasov, J.Ruan, H.Ngo, L.Shuvalova, I.Dubrovska, K.Flores, W.F.Anderson, Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 4O0N (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands:
R: 19.5%
Rfree: 23.8%
Resolution: 2.4Å
Deposited: 2013-12-13
Released:

Target IDP90768          community request

Title: The crystal structure of argininosuccinate synthase from Campylobacter jejuni subsp. jejuni NCTC 11168
Authors: K.Tan, M. Gu, R. Zhang, W.F. Anderson, A. Joachimiak, Center for Structural Genomics of Infectious Diseases (Csgid)
PDB 4NZP (PDBSUM) (Profunc) (GPSS) (MMDB)
R: 18.3%
Rfree: 24.4%
Resolution: 2.31Å
Deposited: 2013-12-12
Released:

Target IDP92047          community request

Title: 2.05 Angstrom Crystal Structure of Ribulose-phosphate 3-epimerase from Toxoplasma gondii.
Authors: Minasov, G. Ruan, J. Ngo, H. Shuvalova, L. Dubrovska, I. Flores, K. Anderson, W.F. Center for Structural Genomics of Infectious Diseases (CSGID).
PDB 4NU7 (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with:
Other ligands: , chloride ion
R: 15.1%
Rfree: 18.7%
Resolution: 2.05Å
Deposited: 2013-12-02
Released:

Target IDP90688          community request

Title: 2.17 Angstrom Crystal Structure of DNA-directed RNA Polymerase Subunit Alpha from Campylobacter jejuni.
Authors: Minasov, G., Shuvalova, L., Dubrovska, I., Winsor, J., Grimshaw, S., Kwon, K., Anderson, W.F., Center for Structural Genomics of Infectious
PDB 4NOI (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands: , chloride ion, iodide ion
R: 17.6%
Rfree: 22.5%
Resolution: 2.17Å
Deposited: 2013-11-19
Released: 2013-12-04

Target IDP92102          community request

Title: Crystal structure of a putative ornithine aminotransferase from Toxoplasma gondii ME49 in complex with pyrodoxal-5-phosphate
Authors: E.V.Filippova, A.Halavaty, J.Ruan, L.Shuvalova, K.Flores, I.Dubrovska, H.Ngo, D.Shanmugam, D.Roos, W.F.Anderson, Center for structural genomics of infectious diseases, Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 4NOG (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: pyridoxal-5'-phosphate
Other ligands: , , 2-[bis-(2-hydroxy-ethyl)-amino]-2-hydroxymethyl-propane-1,3-diol, beta-mercaptoethanol
R: 13.5%
Rfree: 16.5%
Resolution: 1.2Å
Deposited: 2013-11-19
Released:

Target IDP92040          community request

Title: 2.60 Angstrom resolution crystal structure of putative ribose 5-phosphate isomerase from Toxoplasma gondii ME49 in complex with DL-Malic acid
Authors: Halavaty, A.S. Dubrovska, I. Flores, K. Shanmugam, D. Shuvalova, L. Roos, D. Ngo, H. Anderson, W.F. Center for Structural Genomics of Infectious Diseases Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 4NML (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: malate ion
Other ligands: chloride ion
R: 16.6%
Rfree: 20.5%
Resolution: 2.6Å
Deposited: 2013-11-15
Released:
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