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X-ray Structures

Important note for CSGID staff! Before depositing your structure, make sure it follows the guidelines here " PDB deposit guidelines" and here "Crystal structure quality metrics for PDB deposition."

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Page 5 of 37, showing 20 records  out of 725 total, starting on record 81 structures.
Click on the title of a structure below to see more information about that structure.

Target IDP91546          community request

Title: Crystal structure of streptogramin group A antibiotic acetyltransferase VatA from Staphylococcus aureus in complex with acetyl coenzyme A
Authors: P.J.Stogios,G.Minasov,E.Evdokimova,Z.Wawrzak,V.Yim,M.Krishnamoorthy,R.Di Leo,P.Courvalin,A.Savchenko,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid)
PDB 4HUR (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: acetyl coenzyme A
Other ligands: , , Sodium Ion, Sulfate
R: 16.8%
Rfree: 20.2%
Resolution: 2.15Å
Deposited: 2012-11-03
Released: 2012-11-14
Title: Crystal structure of streptogramin group A antibiotic acetyltransferase VatA from Staphylococcus aureus in complex with virginiamycin M1
Authors: P.J.Stogios,G.Minasov,E.Evdokimova,Z.Wawrzak,V.Yim,M.Krishnamoorthy,R.Di Leo,P.Courvalin,A.Savchenko,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid)
PDB 4HUS (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: virginiamycin m1
Other ligands: , , , , Sodium Ion, Sulfate
R: 18.6%
Rfree: 22.8%
Resolution: 2.36Å
Deposited: 2012-11-03
Released: 2012-11-21

Target IDP91126          community request

Title: 2.6 Angstrom Structure of the Extracellular Solute-binding Protein from Staphylococcus aureus in complex with PEG.
Authors: G.Minasov,L.Shuvalova,I.Dubrovska,J.Winsor,F.Bagnoli,F.Falugi,M.Bottomley,G.Grandi,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid)
PDB 4HS7 (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands: , , 3,6,9,12,15,18-hexaoxaicosane-1,20-diol
R: 17%
Rfree: 21.9%
Resolution: 2.6Å
Deposited: 2012-10-29
Released: 2012-11-07

Target IDP90195          community request

Title: Structure of Cowpox CPXV203 in complex with MHCI (H-2Kb)
Authors: W.H.Mccoy Iv,D.H.Fremont,Center For Structural Genomics Of Infectious Diseases (Csgid)
PDB 4HKJ (PDBSUM) (Profunc) (GPSS) (MMDB)
R: 23.1%
Rfree: 25.3%
Resolution: 3Å
Deposited: 2012-10-15
Released: 2012-11-14

Target IDP90526          community request

Title: Crystal Structure of Inorganic Polyphosphate/ATP-NAD Kinase from Yersinia pestis
Authors: Y.Kim,N.Maltseva,R.Jedrzejczak,W.F.Anderson,A.Joachimiak,Center For Structural Genomics Of Infectious Diseases (Csgid)
PDB 4HAO (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands: , , malonate ion
R: 19%
Rfree: 24.6%
Resolution: 2.55Å
Deposited: 2012-09-27
Released:

Target IDP91966          community request

Title: Crystal structure of an amino acid ABC transporter substrate-binding protein from Streptococcus pneumoniae Canada MDR_19A bound to L-arginine, form 2
Authors: P.J.Stogios,Z.Wawrzak,M.Kudritska,G.Minasov,V.Yim,A.Savchenko,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid)
PDB 4H5G (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands: , , , , Sulfate
R: 15.7%
Rfree: 18.6%
Resolution: 1.78Å
Deposited: 2012-09-18
Released: 2012-10-03

Target IDP91955          community request

Title: Crystal structure of iron uptake ABC transporter substrate-binding protein PiaA from Streptococcus pneumoniae Canada MDR_19A bound to Bis-tris propane
Authors: P.J.Stogios,Z.Wawrzak,M.Kudritska,G.Minasov,V.Yim,A.Savchenko,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid)
PDB 4H59 (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands: , , 2-[3-(2-hydroxy-1,1-dihydroxymethyl-ethylamino)-propyla mino]-2-hydroxymethyl-propane-1,3-diol
R: 16.7%
Rfree: 19.1%
Resolution: 1.66Å
Deposited: 2012-09-18
Released: 2012-10-03

Target IDP91966          community request

Title: Crystal structure of an amino acid ABC transporter substrate-binding protein from Streptococcus pneumoniae Canada MDR_19A bound to L-arginine, form 1
Authors: P.J.Stogios,Z.Wawrzak,M.Kudritska,G.Minasov,V.Yim,A.Savchenko,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid)
PDB 4H5F (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands: , , , , , , Sulfate
R: 16.6%
Rfree: 20%
Resolution: 1.9Å
Deposited: 2012-09-18
Released: 2012-10-03

Target IDP91384          community request

Title: Crystal structure of anabolic ornithine carbamoyltransferase from Vibrio vulnificus in complex with carbamoyl phosphate and L-norvaline
Authors: I.G.Shabalin,J.Winsor,S.Grimshaw,T.Osinski,M.D.Chordia,L.Shuvalova,W.F.Anderson,W.Minor,Center For Structural Genomics Of Infectious Diseases (Csgid)
PDB 4H31 (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: carbamoyl phosphate
Other ligands: , , 3,6,9,12,15,18,21,24-octaoxahexacosan-1-ol, norvaline
R: 13.7%
Rfree: 16.7%
Resolution: 1.7Å
Deposited: 2012-09-13
Released: 2012-09-26

Target IDP90163          community request

Title: 1.95 Angstrom Crystal Structure of of Type I 3-Dehydroquinate Dehydratase (aroD) from Clostridium difficile with Covalent Modified Comenic Acid.
Authors: G.Minasov,S.H.Light,L.Shuvalova,M-E.Duban,I.Dubrovska,J.Winsor,L.Papazisi,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid)
PDB 4H3D (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: modified comenic acid
Other ligands: , ,
R: 15.8%
Rfree: 19.9%
Resolution: 1.95Å
Deposited: 2012-09-13
Released:

Target IDP91762          community request

Title: Crystal structure of MccF homolog from Listeria monocytogenes EGD-e
Authors: B.Nocek,W.F.Anderson,A.Joachimiak,Center For Structural Genomics Of Infectious Diseases (Csgid)
PDB 4H1H (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: Sulfate
R: 20.9%
Rfree: 25.3%
Resolution: 2.46Å
Deposited: 2012-09-10
Released: 2012-10-17

Target IDP90922          community request

Title: 1.95 Angstrom Crystal Structure of the Salmonella enterica 3-Dehydroquinate Dehydratase (aroD) E86A Mutant in Complex with Dehydroshikimate (Crystal Form #2)
Authors: S.H.Light,G.Minasov,M.-E.Duban,L.Shuvalova,K.Kwon,A.Lavie,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid)
PDB 4GUH (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: (4s,5r)-4,5-dihydroxy-3-oxocyclohex-1-ene-1-carboxylic acid
Other ligands: nickel (II) ion
R: 19.3%
Rfree: 24.7%
Resolution: 1.95Å
Deposited: 2012-08-29
Released:
Title: 1.78 Angstrom Crystal Structure of the Salmonella enterica 3-Dehydroquinate Dehydratase (aroD) in Complex with Quinate
Authors: S.H.Light,G.Minasov,M.-E.Duban,L.Shuvalova,K.Kwon,A.Lavie,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid)
PDB 4GUI (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: (1s,3r,4s,5r)-1,3,4,5-tetrahydroxycyclohexanecarboxylic acid
Other ligands: nickel (II) ion
R: 16.1%
Rfree: 18.8%
Resolution: 1.78Å
Deposited: 2012-08-29
Released:
Title: 1.62 Angstrom Crystal Structure of the Salmonella enterica 3-Dehydroquinate Dehydratase (aroD) E86A Mutant in Complex with Dehydroshikimate (Crystal Form #1)
Authors: S.H.Light,G.Minasov,M.-E.Duban,L.Shuvalova,K.Kwon,A.Lavie,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid)
PDB 4GUG (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: (4s,5r)-4,5-dihydroxy-3-oxocyclohex-1-ene-1-carboxylic acid
Other ligands:
R: 17.5%
Rfree: 20.8%
Resolution: 1.62Å
Deposited: 2012-08-29
Released:
Title: 1.50 Angstrom Crystal Structure of the Salmonella enterica 3-Dehydroquinate Dehydratase (aroD) in Complex with Shikimate
Authors: S.H.Light,G.Minasov,M.-E.Duban,L.Shuvalova,K.Kwon,A.Lavie,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid)
PDB 4GUJ (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: (3r,4s,5r)-3,4,5-trihydroxycyclohex-1-ene-1-carboxylic acid
Other ligands: Zinc ion
R: 15.7%
Rfree: 18.2%
Resolution: 1.5Å
Deposited: 2012-08-29
Released:
Title: 1.5 Angstrom Crystal Structure of the Salmonella enterica 3-Dehydroquinate Dehydratase (aroD) E86A Mutant
Authors: S.H.Light,G.Minasov,M.-E.Duban,L.Shuvalova,K.Kwon,A.Lavie,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid)
PDB 4GUF (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands:
R: 16.8%
Rfree: 19.1%
Resolution: 1.5Å
Deposited: 2012-08-29
Released:

Target IDP91963          community request

Title: 1.0 Angstrom resolution crystal structure of the branched-chain amino acid transporter substrate binding protein LivJ from Streptococcus pneumoniae str. Canada MDR_19A in complex with Isoleucine
Authors: A.S.Halavaty,M.Kudritska,Z.Wawrzak,P.J.Stogios,V.Yim,A.Savchenko,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid)
PDB 4GNR (PDBSUM) (Profunc) (GPSS) (MMDB)
R: 12.7%
Rfree: 14.7%
Resolution: 1Å
Deposited: 2012-08-17
Released: 2012-09-05

Target IDP91191          community request

Title: Crystal structure of the aminoglycoside phosphotransferase APH(3')-Ia, with substrate kanamycin and small molecule inhibitor 1-NA-PP1
Authors: P.J.Stogios,E.Evdokimova,Z.Wawrzak,G.Minasov,O.Egorova,R.Di Leo,T.Shakya,P.Spanogiannopoulos,N.Todorovic,A.Capretta,G.D.Wright,A.Savchenko,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid)
PDB 4GKH (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with:
Other ligands: , , , 1-tert-butyl-3-(naphthalen-1-yl)-1h-pyrazolo[3,4-d]pyri midin-4-amine, Sodium Ion
R: 16.7%
Rfree: 21.6%
Resolution: 1.86Å
Deposited: 2012-08-11
Released: 2012-09-06
Title: Crystal structure of the aminoglycoside phosphotransferase APH(3')-Ia, with substrate kanamycin and small molecule inhibitor 1-NM-PP1
Authors: P.J.Stogios,E.Evdokimova,Z.Wawrzak,G.Minasov,O.Egorova,R.Di Leo,T.Shakya,P.Spanogiannopoulos,N.Todorovic,A.Capretta,G.D.Wright,A.Savchenko,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid)
PDB 4GKI (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with:
Other ligands: , , , 1-tert-butyl-3-(naphthalen-1-ylmethyl)-1h-pyrazolo[3,4-d]pyrimidin-4-amine, Sodium Ion
R: 16.8%
Rfree: 21.6%
Resolution: 1.88Å
Deposited: 2012-08-11
Released: 2012-09-06

Target IDP90547          community request

Title: Crystal structure of 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (hisA)
Authors: B.Nocek,M.Gu,K.Kwon,W.F.Anderson,A.Joachimiak,Csgid,Center For Structural Genomics Of Infectious Diseases (Csgid)
PDB 4GJ1 (PDBSUM) (Profunc) (GPSS) (MMDB)
R: 18.3%
Rfree: 22.9%
Resolution: 2.15Å
Deposited: 2012-08-09
Released: 2012-09-11
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