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Structure of IDP90564

High resolution crystal structure of transketolase from Campylobacter jejuni subsp. jejuni NCTC 11168

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CSGID target
IDP90564 
PDB Id
3L84 (NCBI MMDB) 
Authors
Nocek B., Makowska-Grzyska M., Maltseva N., Grimshaw S., Anderson,W., Joachimiak, A.  
Responsible person
Boguslaw Nocek 
Responsible lab
Argonne National Laboratory 
Deposition Date
Dec 29, 2009 
Release Date
Feb 09, 2010 

Annotation

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Slides:
  • Asymmetric unit
  • Biological unit
  • B-factors distribution
  • B-factors distribution on the surface
  • Homolog superposition
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    secondary structure, N to C, molecule

    Ligands

    Ligand code Name Ligand type
    GOL glycerol
    ACT acetate ion
    MSE selenomethionine modified residue

    Structure information

    View structure information | Edit structure information (upload a PDB file)

    Unit cell parameters

    Space Group
    C 1 2 1  
    Unit Cell

    a=129.49Å, b=71.18Å, c=69.42Å
    α=90.00, β=109.77, γ=90.00  
    Solvent content
    42.68  
    Matthews coefficient
    2.15  

    Refinement

    Data for the highest resolution shell is in parentheses.
    Resolution range
    40.00-1.36Å (1.39-1.36Å)  
    Rall(%)
    13.3  
    Rwork(%)
    13.2 (21.9)  
    Rfree(%)
    15.2 (23.3)  
    Num. observed reflections
    127082 (9106)  
    Num. Rfree reflections
    6354 (433)  
    Completeness(%)
    99.1 (96.1)  

    Model parameters

    Num Atoms
    5755  
    Num Waters
    737  
    Num Hetatoms
    0  
    Model mean isotropic B factor (Å2)
    8.440  
    RMSD bond length (Å)
    0.014  
    RMSD bond angle
    1.501°  
    Filename uploaded
    IDP90564-BN-6_refmac1-DEPOSIT.pdb (uploaded on Jan 14, 2010 6:44 PM)  
    Inserted
    Jan 14, 2010