Home    Target List    Selection    Community Requests    Clones    XML files    Diffraction Images    Progress    Homolog Search    Clustering    Statistics    News    Help    Log In
To see full content of that page you need the activeISee plugin.
Get the latest version from here.

Structure of IDP90271

Crystal Structure of Swine Flu Virus NS1 N-Terminal RNA Binding Domain from H1N1 Influenza A/California/07/2009

(tree view)
Edit deposit information
CSGID target
IDP90271 
PDB Id
3M8A (NCBI MMDB) 
Authors
Brunzelle, J.S. Wawrzak, Z. Skarina, T. Onopriyenko, O. Savchenko, A. Anderson, W.F. CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES (CSGID)  
Responsible person
Joseph Brunzelle 
Responsible lab
Northwestern University 
Deposition Date
Mar 17, 2010 
Release Date
Apr 28, 2010 

Annotation

Add an annotation | Download molsoft presentation
Slides:
  • Asymmetric unit
  • Biological unit
  • B-factors distribution
  • B-factors distribution on the surface
  • Homolog superposition
    • Presentation Controlls:
    rotate
    with the [Left]-mouse
    drag
    with the [Middle]-mouse (or with [Ctrl]-key pressed)
    zoom
    with the [Left]-mouse in the left zone of the window: zoom-up, unzoom-down
    clipping
    with the [Left]-mouse in the right zone of the window

    Presentation Options:
    background color:
    black, white
    ribbon style:
    normal, smooth
    ribbon color:
    secondary structure, N to C, molecule

    Ligands

    Ligand code Name Ligand type
    MLI malonate ion crystallization
    ACT acetate ion
    NA sodium ion

    Structure information

    View structure information | Edit structure information (upload a PDB file)

    Unit cell parameters

    Space Group
    P 1 21 1  
    Unit Cell

    a=60.85Å, b=156.79Å, c=73.52Å
    α=90.00, β=109.21, γ=90.00  
    Solvent content
    61.43  
    Matthews coefficient
    3.19  

    Refinement

    Data for the highest resolution shell is in parentheses.
    Resolution range
    29.25-2.10Å (0.00-0.00Å)  
    Rall(%)
    17.2  
    Rwork(%)
    17.0 (20.8)  
    Rfree(%)
    20.4 (25.0)  
    Num. observed reflections
    79330 (5549)  
    Num. Rfree reflections
    3998 (244)  
    Completeness(%)
    0.0 (0.0)  

    Model parameters

    Num Atoms
    7179  
    Num Waters
    980  
    Num Hetatoms
    1061  
    Model mean isotropic B factor (Å2)
    31.920  
    RMSD bond length (Å)
    0.010  
    RMSD bond angle
    0.910°  
    RMSD dihedral angle
    2.38°
     
    RMSD improper torsion angle
    16.19°
     
    Filename uploaded
    idp90271s.pdb (uploaded on Apr 07, 2010 2:56 PM)  
    Inserted
    Apr 07, 2010