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Structure of IDP90574

Crystal structure of acetylornithine aminotransferase (argD) from Campylobacter jejuni

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CSGID target
IDP90574 
PDB Id
3NX3 (NCBI MMDB) 
Authors
Anderson, S.M., Wawrzak, Z., Onopriyenko, O., Skarina, T., Anderson, W.F., Savchenko, A., Center for Structural Genomics of Infectious Diseases (CSGID)  
Responsible person
Spencer Anderson 
Responsible lab
Northwestern University 
Deposition Date
Jul 12, 2010 
Release Date
Aug 25, 2010 

Annotation

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Slides:
  • Asymmetric unit
  • Biological unit
  • B-factors distribution
  • B-factors distribution on the surface
  • Homolog superposition
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    secondary structure, N to C, molecule

    Ligands

    Ligand code Name Ligand type
    MG unknown
    MSE selenomethionine modified residue

    Structure information

    View structure information | Edit structure information (upload a PDB file)

    Unit cell parameters

    Space Group
    P 21 21 21  
    Unit Cell

    a=51.11Å, b=66.16Å, c=214.34Å
    α=90.00, β=90.00, γ=90.00  
    Solvent content
    40.03  
    Matthews coefficient
    2.05  

    Refinement

    Data for the highest resolution shell is in parentheses.
    Resolution range
    29.40-1.80Å (1.86-1.80Å)  
    Rall(%)
    15.5  
    Rwork(%)
    15.3 (20.5)  
    Rfree(%)
    19.6 (26.2)  
    Num. observed reflections
    71445 (6211)  
    Num. Rfree reflections
    3572 (329)  
    Completeness(%)
    99.3 (96.8)  

    Model parameters

    Num Atoms
    5950  
    Num Waters
    804  
    Num Hetatoms
    895  
    Model mean isotropic B factor (Å2)
    25.600  
    RMSD bond length (Å)
    0.007  
    RMSD bond angle
    1.040°  
    RMSD dihedral angle
    11.82°
     
    Filename uploaded
    rcsb060387.pdb (uploaded on Aug 21, 2010 4:03 PM)  
    Inserted
    Aug 21, 2010