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Structure of IDP90557

Crystal structure of putative 3-ketoacyl-(acyl-carrier-protein) reductase from Vibrio cholerae O1 biovar eltor str. N16961 in complex with NADP+

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CSGID target
IDP90557 
PDB Id
3OP4 (NCBI MMDB) 
Authors
Hou, J., Chruszcz, M., Onopriyenko, O., Grimshaw, S., Porebski, P., Zheng, H., Savchenko, A., Anderson, W.,Minor, W.  
Responsible person
Jing Hou 
Responsible lab
University of Virginia 
Deposition Date
Aug 31, 2010 
Release Date
Sep 22, 2010 

Annotation

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Slides:
  • Asymmetric unit
  • Biological unit
  • B-factors distribution
  • B-factors distribution on the surface
  • ConSurf
  • Homolog superposition
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    secondary structure, N to C, molecule

    Ligands

    Ligand code Name Ligand type
    NAP NADP nicotinamide-adenine-dinucleotide phosphate biological
    ACT acetate ion
    MSE selenomethionine modified residue

    Structure information

    View structure information | Edit structure information (upload a PDB file)

    Unit cell parameters

    Space Group
    C 2 2 21  
    Unit Cell

    a=71.06Å, b=104.09Å, c=126.07Å
    α=90.00, β=90.00, γ=90.00  
    Solvent content
    43.66  
    Matthews coefficient
    2.18  

    Refinement

    Data for the highest resolution shell is in parentheses.
    Resolution range
    50.00-1.60Å (1.64-1.60Å)  
    Rall(%)
    14.9  
    Rwork(%)
    14.7 (20.0)  
    Rfree(%)
    17.5 (24.8)  
    Num. observed reflections
    61387 (4264)  
    Num. Rfree reflections
    3130 (209)  
    Completeness(%)
    99.6 (95.2)  

    Model parameters

    Num Atoms
    4348  
    Num Waters
    503  
    Num Hetatoms
    0  
    Model mean isotropic B factor (Å2)
    17.410  
    RMSD bond length (Å)
    0.018  
    RMSD bond angle
    1.818°  
    Filename uploaded
    deposit.pdb (uploaded on Sep 01, 2010 2:21 PM)  
    Inserted
    Sep 01, 2010