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X-ray Structures

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Page 1 of 22, showing 20 records  out of 440 total, starting on record 1 structures.
Click on the title of a structure below to see more information about that structure.

Target IDP91189          community request

Title: Inhibition of an antibiotic resistance enzyme: crystal structure of aminoglycoside phosphotransferase APH(2")-ID/APH(2")-IVA in complex with kanamycin inhibited with quercetin
Authors: Stogios P.J., Minasov G., Dong A., Evdokimova E., Egorova O., Di Leo R., Li H., Shakya T., Wright G.D., Savchenko A., Anderson W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 4DFU (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: kanamycin a
Other ligands: 3,5,7,3',4'-pentahydroxyflavone, chloride ion
R: 22.2%
Rfree: 27%
Resolution: 1.98Å
Deposited: 2012-01-24
Released: 2012-02-08
Title: Crystal structure of aminoglycoside phosphotransferase APH(2")-Id/APH(2")-IVa in complex with kanamycin
Authors: Stogios P.J., Minasov G., Osipiuk J., Evdokimova E., Egorova O., Di Leo R., Li H., Savchenko A., Anderson W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 4DFB (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: kanamycin a
Other ligands: chloride ion
R: 20.8%
Rfree: 25.8%
Resolution: 1.95Å
Deposited: 2012-01-23
Released: 2012-02-08
Title: Crystal structure of aminoglycoside phosphotransferase APH(2")-Id/APH(2")-IVa in complex with HEPES
Authors: Stogios P.J, Minasov G., Tan K., Nocek B., Evdokimova E., Egorova O., Di Leo R., Li H., Savchenko A., Anderson W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 4DE4 (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands: 4-(2-hydroxyethyl)-1-piperazine ethanesulfonic acid
R: 22.4%
Rfree: 27.2%
Resolution: 2Å
Deposited: 2012-01-19
Released: 2012-02-08

Target IDP91187          community request

Title: Crystal structure of aminoglycoside phosphotransferase APH(2")-Ib/APH(2'')-IIa in complex with ADP
Authors: Stogios P.J., Minasov G., Singer A.U., Tan K., Nocek B., Evdokimova E., Egorova O., Di Leo R., Savchenko A., Anderson W.F., Center for Structural Genomics of Infectious Diseases
PDB 4DCA (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: adenosine-5'-diphosphate
Other ligands: unknown
R: 19.7%
Rfree: 22.5%
Resolution: 1.8Å
Deposited: 2012-01-17
Released: 2012-02-01

Target IDP91189          community request

Title: Crystal structure of aminoglycoside phosphotransferase APH(2")-Id/APH(2")-IVa
Authors: Stogios P.J., Minasov G., Tan K., Nocek B., Singer A.U., Evdokimova E., Egorova, O., Di Leo R., Li H., Shakya T., Wright G.D., Savchenko A., Anderson W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 4DBX (PDBSUM) (Profunc) (GPSS) (MMDB)
R: 18.7%
Rfree: 22.9%
Resolution: 2Å
Deposited: 2012-01-19
Released: 2012-02-08

Target IDP91369          community request

Title: 1.95 Angstrom Resolution Crystal Structure of N-acetyl-D-glucosamine kinase from Vibrio vulnificus.
Authors: G.Minasov, Z.Wawrzak, O.Onopriyenko, T.Skarina, L.Papazisi, A.Savchenko, W.F.Anderson, Center for Structural Genomics of Infectious Diseases (CSGID).
PDB 4DB3 (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: zinc ion
Other ligands: chloride ion, glycerol, sulfate ion
R: 17%
Rfree: 19.8%
Resolution: 1.95Å
Deposited: 2012-01-13
Released:

Target IDP91387          community request

Title: 1.80 Angstrom resolution crystal structure of a putative translation initiation inhibitor from Vibrio vulnificus CMCP6
Authors: Halavaty, A.S., Minasov, G. Filippova, E.V., Dubrovska, I., Winsor, J., Shuvalova, L., Papazisi, L., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 3VCZ (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands: calcium ion, glycerol, unknown
R: 15.7%
Rfree: 18.3%
Resolution: 1.8Å
Deposited: 2012-01-04
Released:

Target IDP91206          community request

Title: 1.7 Angstrom Resolution Crystal Structure of Shikimate Kinase from Bacteroides thetaiotaomicron.
Authors: Minasov, G. Light, S.H. Halavaty, A. Shuvalova, L. Papazisi, L. Anderson, W.F. Center for Structural Genomics of Infectious Diseases (CSGID).
PDB 3VAA (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands: beta-mercaptoethanol, di(hydroxyethyl)ether, glycerol, sulfate ion
R: 16.5%
Rfree: 19.9%
Resolution: 1.7Å
Deposited: 2011-12-29
Released:

Target IDP91417          community request

Title: 1.60 Angstrom resolution crystal structure of an arginine repressor from Vibrio vulnificus CMCP6
Authors: Halavaty, A.S. Minasov, G. Filippova, E. Shuvalova, L. Winsor, J. Dubrovska, I. Peterson, S. Anderson, W.F. Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 3V4G (PDBSUM) (Profunc) (GPSS) (MMDB)
R: 18.2%
Rfree: 19.8%
Resolution: 1.6Å
Deposited: 2011-12-14
Released:

Target IDP91125          community request

Title: 2.4 Angstrom Crystal Structure of Superantigen-like Protein from Staphylococcus aureus.
Authors: G.Minasov, A.Halavaty, L.Shuvalova, E.V.Filippova, I.Dubrovska, J.Winsor, Bagnoli, F., Falugi, F., Bottomley, M., Grandi, G., W.F.Anderson, Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 3V05 (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands: chloride ion
R: 19.8%
Rfree: 26%
Resolution: 2.4Å
Deposited: 2011-12-07
Released: 2011-12-21

Target IDP91187          community request

Title: Crystal structure of aminoglycoside phosphotransferase APH(2")-Ib/APH(2'')-IIa, apo form
Authors: Stogios P.J., Minasov G., Singer A.U., Tan K., Nocek B., Evdokimova E., Egorova O., Di Leo R., Savchenko A., Anderson W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 3UZR (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands: 1,2-ethanediol, di(hydroxyethyl)ether, tetraethylene glycol, unknown
R: 19.6%
Rfree: 24.5%
Resolution: 1.95Å
Deposited: 2011-12-07
Released: 2011-12-21

Target IDP90800          community request

Title: Crystal Structure of Pantoate--Beta-Alanine Ligase from Campylobacter jejuni complexed with AMP and vitamin B5
Authors: Kim, Y., Zhou, M., Kwon, K, Anderson, W.F., Joachimiak, A., CSGID
PDB 3UY4 (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands: [(1-amino-3-methyl-butyl)-hydroxy-phosphinoyl]-acetic a cid, adenosine monophosphate, glycerol
R: 17.2%
Rfree: 20.1%
Resolution: 1.85Å
Deposited: 2011-12-05
Released:

Target IDP90525          community request

Title: 1.80 Angstrom resolution crystal structure of orotidine 5'-phosphate decarboxylase from Vibrio cholerae O1 biovar eltor str. N16961 in complex with uridine-5'-monophosphate (UMP)
Authors: Halavaty, A.S., Minasov, G., Winsor, J., Shuvalova, L., Kuhn, M., Filippova, E.V., Papazisi, L., Anderson, W.F., Center for Structural Genomics of Infectious Diseases
PDB 3UWQ (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: uridine-5'-monophosphate
Other ligands: 2-amino-2-hydroxymethyl-propane-1,3-diol, 3,6,9,12,15,18,21,24,27-nonaoxanonacosane-1,29-diol, di(hydroxyethyl)ether, triethylene glycol
R: 15.2%
Rfree: 17.8%
Resolution: 1.8Å
Deposited: 2011-12-02
Released: 2011-12-14

Target IDP91101          community request

Title: Crystal Structure of Superantigen-like Protein, Exotoxin from Staphylococcus aureus subsp. aureus NCTC 8325
Authors: E.V.Filippova, G.Minasov, L.Shuvalova, A.Halavaty, J.Winsor, I.Dubrovska, F.Bagnoli, F.Falugi, M.Bottomley, G.Grandi, W.F.Anderson, Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 3URY (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands: chloride ion
R: 19.1%
Rfree: 24.7%
Resolution: 1.9Å
Deposited: 2011-11-22
Released:

Target IDP91384          community request

Title: 2.9 Angstrom Crystal Structure of Ornithine Carbamoyltransferase (ArgF) from Vibrio vulnificus.
Authors: Minasov, G. Halavaty, A. Shuvalova, L. Winsor, J. Dubrovska, I. Papazisi, L. Anderson, W.F. Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 3UPD (PDBSUM) (Profunc) (GPSS) (MMDB)
R: 16%
Rfree: 19.5%
Resolution: 2.91Å
Deposited: 2011-11-17
Released:

Target IDP91135          community request

Title: 2.0 Angstrom Crystal Structure of Ligand Binding Component of ABC-type Import System from Staphylococcus aureus with Zinc bound.
Authors: G.Minasov, Z.Wawrzak, A.Halavaty, L.Shuvalova, I.Dubrovska, J.Winsor, O.Kiryukhina, F.Bagnoli, F.Falugi, M.Bottomley, G.Grandi, W.F.Anderson, Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 3UN6 (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: zinc ion
Other ligands: phosphate ion
R: 16.6%
Rfree: 20.6%
Resolution: 2.01Å
Deposited: 2011-11-15
Released:

Target IDP90515          community request

Title: 30S ribosomal protein S15 from Campylobacter jejuni
Authors: Osipiuk, J., Nocek, B., Gu, M., Kwon, K., Anderson, W.F., Joachimiak, A., CSGID
PDB 3ULW (PDBSUM) (Profunc) (GPSS) (MMDB)
R: 25.2%
Rfree: 28.6%
Resolution: 2.36Å
Deposited: 2011-11-11
Released:

Target IDP90286          community request

Title: 1.85 Angstrom Crystal Structure of Putative Sedoheptulose-1,7 bisphosphatase from Toxoplasma gondii.
Authors: G.Minasov, J.Ruan, Z.Wawrzak, A.Halavaty, L.Shuvalova, O.S.Harb, H.Ngo, W.F.Anderson, Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 3UKS (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands: di(hydroxyethyl)ether
R: 15.6%
Rfree: 18.5%
Resolution: 1.85Å
Deposited: 2011-11-09
Released: 2011-11-23

Target IDP90517          community request

Title: Crystal structure of a probable undecaprenyl diphosphate synthase (uppS) from Campylobacter jejun
Authors: B.Nocek, M.Gu, S.Grimshaw, W.F.Anderson, A.Joachimiak, Niaid, Center for Structural Genomics of Infectious Diseases (CSGID
PDB 3UGS (PDBSUM) (Profunc) (GPSS) (MMDB)
R: 20.7%
Rfree: 25.3%
Resolution: 2.46Å
Deposited: 2011-11-03
Released: 2011-12-07

Target IDP90793          community request

Title: The crystal structure of glycyl-tRNA synthetase subunit alpha from Campylobacter jejuni subsp. jejuni NCTC in complex with ATP
Authors: Tan, K., Zhou, M., Kwon, K., Anderson, W.F., Joachimiak, A.Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 3UFG (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands: adenosine-5'-triphosphate
R: 17.8%
Rfree: 25.5%
Resolution: 2.55Å
Deposited: 2011-11-01
Released:
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