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X-ray Structures

Important note for CSGID staff! Before depositing your structure, make sure it follows the guidelines here " PDB deposit guidelines" and here "Crystal structure quality metrics for PDB deposition."

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Page 1 of 25, showing 20 records  out of 485 total, starting on record 1 structures.
Click on the title of a structure below to see more information about that structure.

Target IDP91774          community request

Title: Crystal Structure of Vancomycin Resistance Bifunctional D,D-dipeptidase/D,D-carboxypeptidase VanXYg from Enterococcus faecalis
Authors: Stogios PJ, Wawrzak Z, Evdokimova E, Minasov G, Egorova O, Di Leo R, Kudritska M, Yim V, Meziane-Cherif D, Courvalin P, Savchenko A, Anderson WF, Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 4F78 (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: zinc ion
Other ligands: 1,2-ethanediol, chloride ion, glycerol, sulfate ion
R: 15.5%
Rfree: 18.6%
Resolution: 1.95Å
Deposited: 2012-05-15
Released:

Target IDP91868          community request

Title: Crystal structure of aminoglycoside antibiotic 6'-N-acetyltransferase AAC(6')-Ig from Acinetobacter haemolyticus, apo
Authors: Stogios PJ, Evdokimova E, Dong A, Minasov G, Yim V, Courvalin P, Savchenko A, Anderson Wf, Center For Structural Genomics Of Infectious Diseases (CSGID)
PDB 4F0Y (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands: chloride ion, glycerol, unknown
R: 18.4%
Rfree: 24%
Resolution: 2.56Å
Deposited: 2012-05-05
Released: 2012-05-16

Target IDP91761          community request

Title: CRYSTAL structure of MccF-like protein in the complex with AMP from Streptococcus Pneumoniae
Authors: B.Nocek, W.F.Anderson, A.Joachimiak, Center for Structural Genomics of Infectious Diseases(CSGID)
PDB 4EYS (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: adenosine monophosphate
Other ligands: acetate ion, sulfate ion
R: 17%
Rfree: 19.8%
Resolution: 1.58Å
Deposited: 2012-05-01
Released: 2012-06-13

Target IDP91988          community request

Title: Crystal structure of putative phosphate ABC transporter, periplasmic phosphate-binding protein PstS 1 (PBP1) from Streptococcus pneumoniae Canada MDR_19A
Authors: Stogios Pj, Wawrzak Z, Kudritska M, Minasov G, Yim V, Savchenko A, Anderson Wf, Center For Structural Genomics Of Infectious Diseases (Csgid)
PDB 4EXL (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands: chloride ion, unknown
R: 16.8%
Rfree: 21.2%
Resolution: 1.68Å
Deposited: 2012-04-30
Released:

Target IDP91868          community request

Title: Crystal structure of aminoglycoside antibiotic 6'-N-acetyltransferase AAC(6')-Ig from Acinetobacter haemolyticus in complex with tobramycin
Authors: P.J.Stogios,E.Evdokimova,G.Minasov,V.Yim,P.Courvalin,A.Savchenko,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (CSGID)
PDB 4EVY (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: tobramycin
Other ligands: chloride ion, Potassium
R: 16.9%
Rfree: 21.3%
Resolution: 1.77Å
Deposited: 2012-04-26
Released: 2012-05-09

Target IDP91959          community request

Title: 1.5 Angstrom crystal structure of soluble domain of membrane-anchored thioredoxin family protein from Streptococcus pneumoniae strain Canada MDR_19A
Authors: Z.Wawrzak,P.J.Stogios,G.Minasov,M.Kudritska,V.Yim,A.Savchenko,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid)
PDB 4EVM (PDBSUM) (Profunc) (GPSS) (MMDB)
R: 17%
Rfree: 19.8%
Resolution: 1.51Å
Deposited: 2012-04-26
Released: 2012-05-09

Target IDP91991          community request

Title: 1.5 Angstrom Crystal Structure of Spermidine/Putrescine ABC Transporter Substrate-Binding Protein from Streptococcus pneumoniae strain Canada MDR_19A in Complex with Calcium and HEPES.
Authors: G.Minasov,Z.Wawrzak,P.J.Stogios,M.Kudritska,V.Yim,A.Savchenko,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid)
PDB 4EQB (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands: 4-(2-hydroxyethyl)-1-piperazine ethanesulfonic acid, calcium ion, chloride ion, di(hydroxyethyl)ether
R: 15.7%
Rfree: 18.6%
Resolution: 1.5Å
Deposited: 2012-04-18
Released:

Target IDP91961          community request

Title: 1.4 Angstrom Crystal Structure of Putative ABC Transporter Substrate-Binding Protein from Streptococcus pneumoniae strain Canada MDR_19A in Complex with Glutathione.
Authors: G.Minasov,Z.Wawrzak,P.J.Stogios,S.H.Light,M.Kudritska,V.Yim,A.Savchenko,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid)
PDB 4EQ9 (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: glutathione
R: 16.9%
Rfree: 19%
Resolution: 1.4Å
Deposited: 2012-04-18
Released:

Target IDP91191          community request

Title: Crystal structure of the aminoglycoside phosphotransferase APH(3')-Ia, ATP-bound
Authors: P.J.Stogios,G.Minasov,K.Tan,E.Evdokimova,O.Egorova,R.Di Leo,T.Shakya,G.D.Wright,A.Savchenko,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid)
PDB 4EJ7 (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: adenosine-5'-triphosphate
Other ligands: calcium ion, di(hydroxyethyl)ether
R: 21.5%
Rfree: 25.2%
Resolution: 2.29Å
Deposited: 2012-04-06
Released: 2012-04-18

Target IDP90300          community request

Title: 1.37 Angstrom resolution crystal structure of apo-form of a putative deoxyribose-phosphate aldolase from Toxoplasma gondii ME49
Authors: Halavaty, A.S., Ruan, J., Minasov, G., Shuvalova, L., Ueno, A., Igarashi, M., Ngo, H., Anderson, W.F., Center For Structural Genomics Of Infectious Diseases (Csgid)
PDB 4EIV (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands: beta-mercaptoethanol, chloride ion
R: 15.2%
Rfree: 18.5%
Resolution: 1.37Å
Deposited: 2012-04-05
Released:

Target IDP90570          community request

Title: An X-ray Crystal Structure of a putative Bifunctional Phosphoribosylaminoimidazolecarboxamide Formyltransferase/IMP Cyclohydrolase
Authors: Brunzelle, J.S., Wawrzak, Z. Onopriyenko, O., Kwok, J., Anderson, W.F., Savchenko, A., Center For Structural Genomics Of Infectious Diseases
PDB 4EHI (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands: 2-[bis-(2-hydroxy-ethyl)-amino]-2-hydroxymethyl-propane-1,3-diol, sulfate ion
R: 17.4%
Rfree: 21.2%
Resolution: 2.28Å
Deposited: 2012-04-02
Released: 2012-04-02

Target IDP91145          community request

Title: 1.85 Angstrom crystal structure of native hypothetical protein SAOUHSC_02783 from Staphylococcus aureus.
Authors: M.Biancucci,G.Minasov,A.Halavaty,E.V.Filippova,L.Shuvalova,I.Dubrovska,J.Winsor,F.Bagnoli,F.Falugi,M.Bottomley,G.Grandi,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid)
PDB 4EGD (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: calcium ion
Other ligands: chloride ion
R: 17%
Rfree: 21.5%
Resolution: 1.85Å
Deposited: 2012-03-30
Released:
Title: 1.9 Angstrom resolution crystal structure of Se-methionine hypothetical protein SAOUHSC_02783 from Staphylococcus aureus.
Authors: Biancucci, M., Minasov, G., Halavaty, A., Filippova, E.V., Shuvalova, L., Dubrovska, I., Winsor, J., Bagnoli, F., Falugi, F., Bottomley, M., Grandi, G., Anderson, W.F., Center for Structural Genomics of Infectious Diseases.
PDB 4EG9 (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: calcium ion
R: 21.8%
Rfree: 27.1%
Resolution: 1.9Å
Deposited: 2012-03-30
Released: 2012-04-11

Target IDP91046          community request

Title: Crystal structure of the cytoplasmic domain of vancomycin resistance serine racemase VanTg
Authors: P.J.Stogios,Z.Wawrzak,G.Minasov,E.Evdokimova,O.Egorova,J.Cosme,R.Di Leo,M.Krishnamoorthy,D.Meziane-Cherif,P.Courvalin,A.Savchenko,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid)
PDB 4ECL (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands: chloride ion, sulfate ion
R: 18.3%
Rfree: 23.3%
Resolution: 2.02Å
Deposited: 2012-03-26
Released:

Target IDP91213          community request

Title: 2.5 Angstrom Resolution Crystal Structure of Bifidobacterium longum Chorismate Synthase
Authors: S.H.Light,G.Minasov,S.N.Krishna,L.Shuvalova,K.Kwon,A.Lavie,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid)
PDB 4ECD (PDBSUM) (Profunc) (GPSS) (MMDB)
R: 20%
Rfree: 25.3%
Resolution: 2.5Å
Deposited: 2012-03-26
Released:

Target IDP91783          community request

Title: Crystal structure of aminoglycoside 4'-O-adenylyltransferase ANT(4')-IIb, tobramycin-bound
Authors: P.J.Stogios,A.Dong,G.Minasov,E.Evdokimova,O.Egorova,V.Yim,M.Kudritska,P.Courvalin,A.Savchenko,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid)
PDB 4EBK (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: tobramycin
Other ligands: 1,2-ethanediol, chloride ion, iodide ion
R: 17.4%
Rfree: 22.1%
Resolution: 2.15Å
Deposited: 2012-03-23
Released: 2012-04-04
Title: Crystal structure of aminoglycoside 4'-O-adenylyltransferase ANT(4')-IIb, apo
Authors: P.J.Stogios,Z.Wawrzak,G.Minasov,E.Evdokimova,O.Egorova,V.Yim,M.Kudritska,P.Courvalin,A.Savchenko,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid)
PDB 4EBJ (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands: 1,2-ethanediol, sulfate ion
R: 16.7%
Rfree: 19.2%
Resolution: 1.6Å
Deposited: 2012-03-23
Released: 2012-04-04

Target IDP91761          community request

Title: Crystal structure of MccF-like protein from Streptococcus pneumoniae
Authors: B.Nocek,A.Tikhonov,K.Kwon,K.Severinov,W.F.Anderson,A.Joachimiak,Center For Structural Genomics Of Infectious Diseases (Csgid)
PDB 4E94 (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands: glycerol, sulfate ion
R: 14.7%
Rfree: 17.5%
Resolution: 1.65Å
Deposited: 2012-03-20
Released: 2012-04-25

Target IDP91869          community request

Title: Crystal structure of aminoglycoside antibiotic 6'-N-acetyltransferase AAC(6')-Ih from Acinetobacter baumannii
Authors: P.J.Stogios,G.Minasov,A.Dong,E.Evdokimova,V.Yim,P.Courvalin,A.Savchenko,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid)
PDB 4E8O (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands: chloride ion
R: 18.8%
Rfree: 22.8%
Resolution: 2.14Å
Deposited: 2012-03-20
Released: 2012-04-04

Target IDP91546          community request

Title: Crystal structure of streptoframin group A antibiotic acetyltransferase VatA from Staphylococcus aureus
Authors: P.J.Stogios,G.Minasov,A.Dong,E.Evdokimova,V.Yim,M.Krishnamoorthy,R.Di Leo,P.Courvalin,A.Savchenko,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid)
PDB 4E8L (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands: chloride ion, sulfate ion, unknown
R: 21.1%
Rfree: 25.8%
Resolution: 2.7Å
Deposited: 2012-03-20
Released: 2012-04-04
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