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Structure of IDP02028

Structure of the ClpP subunit of the ATP-dependent Clp Protease from Coxiella burnetii

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CSGID target
IDP02028 
PDB Id
3Q7H (NCBI MMDB) 
Authors
S.M.Anderson,Z.Wawrzak,E.Gordon,J.Hasseman,W.F.Anderson,A.Savchenko,Center For Structural Genomics Of Infectious Diseases (Csgid) 
Responsible person
Spencer Anderson 
Responsible lab
Northwestern University 
Deposition Date
Jan 04, 2011 
Release Date
Jan 12, 2011 

Annotation

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Slides:
  • Asymmetric unit
  • Biological unit
  • B-factors distribution
  • B-factors distribution on the surface
  • Homolog superposition
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    secondary structure, N to C, molecule

    Ligands

    Ligand code Name Ligand type
    CA calcium ion crystallization
    PEG di(hydroxyethyl)ether crystallization
    MSE selenomethionine modified residue

    Structure information

    View structure information | Edit structure information (upload a PDB file)

    Unit cell parameters

    Space Group
    P 1 21 1  
    Unit Cell

    a=101.91Å, b=137.47Å, c=127.78Å
    α=90.00, β=109.03, γ=90.00  
    Solvent content
    55.32  
    Matthews coefficient
    2.75  

    Refinement

    Data for the highest resolution shell is in parentheses.
    Resolution range
    37.49-2.50Å (2.59-2.50Å)  
    Rall(%)
    17.2  
    Rwork(%)
    17.0 (21.4)  
    Rfree(%)
    20.8 (27.3)  
    Num. observed reflections
    120469 (11387)  
    Num. Rfree reflections
    6023 (551)  
    Completeness(%)
    99.9 (99.8)  

    Model parameters

    Num Atoms
    19929  
    Num Waters
    1355  
    Num Hetatoms
    2288  
    Model mean isotropic B factor (Å2)
    39.220  
    RMSD bond length (Å)
    0.009  
    RMSD bond angle
    1.119°  
    RMSD dihedral angle
    14.732°
     
    Filename uploaded
    rcsb063290.pdb (uploaded on Jan 13, 2011 1:05 PM)  
    Inserted
    Jan 13, 2011