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Structure of IDP00203

Crystal Structure of N-acetyl-L-glutamate kinase from Yersinia pestis

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CSGID target
IDP00203 
PDB Id
3T7B (NCBI MMDB) 
Authors
M.W.Demas,R.G.Solberg,D.R.Cooper,M.Chruszcz,P.J.Porebski,H.Zheng,O.Onopriyenko,T.Skarina,A.Savchenko,W.F.Anderson,W.Minor,Center For Structural Genomics Of Infectious Diseases (Csgid) 
Responsible person
David Cooper 
Responsible lab
University of Virginia 
Deposition Date
Jul 29, 2011 
Release Date
Sep 14, 2011 

Annotation

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Slides:
  • Asymmetric unit
  • Biological unit
  • B-factors distribution
  • B-factors distribution on the surface
  • ConSurf
  • Homolog superposition
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    secondary structure, N to C, molecule

    Ligands

    Ligand code Name Ligand type
    TAR d(-)-tartaric acid
    MSE selenomethionine modified residue

    Structure information

    View structure information | Edit structure information (upload a PDB file)

    Unit cell parameters

    Space Group
    C 2 2 21  
    Unit Cell

    a=126.46Å, b=134.69Å, c=98.02Å
    α=90.00, β=90.00, γ=90.00  
    Solvent content
     
    Matthews coefficient
     

    Refinement

    Data for the highest resolution shell is in parentheses.
    Resolution range
    50.00-2.50Å (2.57-2.50Å)  
    Rall(%)
    18.0  
    Rwork(%)
    17.8 (25.5)  
    Rfree(%)
    21.3 (28.7)  
    Num. observed reflections
    29001 (2110)  
    Num. Rfree reflections
    1479 (125)  
    Completeness(%)
    99.0 (99.1)  

    Model parameters

    Num Atoms
    3881  
    Num Waters
    102  
    Num Hetatoms
    0  
    Model mean isotropic B factor (Å2)
    25.000  
    RMSD bond length (Å)
    0.015  
    RMSD bond angle
    1.540°  
    Filename uploaded
    hkl_refine_55.pdb (uploaded on Jul 29, 2011 5:43 PM)  
    Inserted
    Jul 29, 2011