Structure of IDP95066

Crystal structure of rifampin phosphotransferase RPH-Lm from Listeria monocytogenes in complex with rifampin-phosphate

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CSGID target
IDP95066 
PDB Id
5FBU (NCBI MMDB) 
Authors
P.J.Stogios,Z.Wawrzak,T.Skarina,V.Yim,A.Savchenko,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid) 
Responsible person
Peter Stogios 
Responsible lab
University of Calgary 
Deposition Date
Dec 14, 2015 
Release Date
Dec 30, 2015 

Annotation

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Ligands

Ligand code Name Ligand type
MPD unknown crystallization
5WP biological
175 3,5-dihydro-5-methylidene-4h-imidazol-4-on

Structure information

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Unit cell parameters

Space Group
P 65 2 2  
Unit Cell

a=151.63Å, b=151.63Å, c=191.51Å
α=90.00, β=90.00, γ=120.00 
Solvent content
 
Matthews coefficient
 

Refinement

Data for the highest resolution shell is in parentheses.
Resolution range
49.63-2.85Å (2.95-2.85Å)  
Rall(%)
24.1 
Rwork(%)
23.8 (32.3) 
Rfree(%)
29.4 (39.5) 
Num. observed reflections
32396 (2885) 
Num. Rfree reflections
1532 (133) 
Completeness(%)
99.9 (1.0) 

Model parameters

Num Atoms
5442  
Num Waters
167  
Num Hetatoms
238  
Model mean isotropic B factor
76.480Å2  
RMSD bond length
0.007Å  
RMSD bond angle
1.341°  
RMSD dihedral angle
16.516°
 
Filename uploaded
5fbu.pdb (uploaded on Mar 24, 2016 12:34 PM)  
Inserted
Dec 15, 2015