Structure of IDP95436

Crystal structure of an Antibiotic_NAT family aminoglycoside acetyltransferase HMB0038 from an uncultured soil metagenomic sample in complex with coenzyme A

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CSGID target
IDP95436 
PDB Id
5HT0 (NCBI MMDB) 
Authors
Z.Xu,P.J.Stogios,Z.Wawrzak,T.Skarina,V.Yim,A.Savchenko,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid) 
Responsible person
Peter Stogios 
Responsible lab
University of Calgary 
Deposition Date
Jan 26, 2016 
Release Date
Mar 02, 2016 

Annotation

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Ligands

Ligand code Name Ligand type
175 3,5-dihydro-5-methylidene-4h-imidazol-4-on biological
SO4 sulfate crystallization

Structure information

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Unit cell parameters

Space Group
C 1 2 1  
Unit Cell

a=107.02Å, b=159.50Å, c=146.22Å
α=90.00, β=94.74, γ=90.00 
Solvent content
 
Matthews coefficient
 

Refinement

Data for the highest resolution shell is in parentheses.
Resolution range
24.97-2.75Å (2.82-2.75Å)  
Rall(%)
20.5 
Rwork(%)
20.4 (31.3) 
Rfree(%)
23.3 (30.8) 
Num. observed reflections
62082 (3197) 
Num. Rfree reflections
2085 (121) 
Completeness(%)
95.1 (74.0) 

Model parameters

Num Atoms
12016  
Num Waters
340  
Num Hetatoms
736  
Model mean isotropic B factor
54.320Å2  
RMSD bond length
0.014Å  
RMSD bond angle
1.827°  
RMSD dihedral angle
16.967°
 
Filename uploaded
5ht0.pdb (uploaded on Mar 30, 2016 9:33 AM)  
Inserted
Jan 26, 2016