Structure of IDP91189

Crystal structure of APH(2")-IVa in complex with plazomicin

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CSGID target
IDP91189 
PDB Id
6CD7 (NCBI MMDB) 
Authors
'P.J.Stogios,E.Evdokimova,A.Dong,R.Di Leo,A.Savchenko,K.J.Satchell,J.Joachimiak,Center For Structural Genomics Of Infectious Diseases (Csgid)' 
Responsible person
Peter Stogios 
Responsible lab
University of Calgary 
Deposition Date
Feb 08, 2018 
Release Date
Jan 31, 2018 

Annotation

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Ligands

Ligand code Name Ligand type
CL chloride crystallization
EDS biological

Structure information

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Unit cell parameters

Space Group
P 1 21 1  
Unit Cell

a=43.45Å, b=101.81Å, c=72.92Å
α=90.00, β=98.47, γ=90.00 
Solvent content
 
Matthews coefficient
 

Refinement

Data for the highest resolution shell is in parentheses.
Resolution range
19.60-1.53Å (1.55-1.53Å)  
Rall(%)
17.3 
Rwork(%)
17.1 (28.9) 
Rfree(%)
20.8 (38.0) 
Num. observed reflections
98601 (2720) 
Num. Rfree reflections
5028 (152) 
Completeness(%)
99.5 (91.0) 

Model parameters

Num Atoms
5040  
Num Waters
1155  
Num Hetatoms
1250  
Model mean isotropic B factor
28.730Å2  
RMSD bond length
0.010Å  
RMSD bond angle
1.090°  
RMSD dihedral angle
22.973°
 
Filename uploaded
6cd7.pdb (uploaded on Feb 28, 2018 7:56 AM)  
Inserted
Jan 20, 2018