Structure of IDP96708

Crystal structure of acetoin dehydrogenase YohF from Salmonella typhimurium

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CSGID target
IDP96708 
PDB Id
6WON (NCBI MMDB) 
Authors
Stogios PJ, Skarina T, Mesa N, Endres M, Savchenko A, Joachimiak A, Satchell KJF, Center for Structural Genomics of Infectious Diseases (CSGID) 
Responsible person
Peter Stogios 
Responsible lab
University of Calgary 
Deposition Date
Apr 25, 2020 
Release Date
May 13, 2020 

Annotation

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Ligands

Ligand code Name Ligand type
CL chloride crystallization
SO4 sulfate crystallization

Structure information

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Unit cell parameters

Space Group
P 21 21 21  
Unit Cell

a=72.55Å, b=114.17Å, c=219.34Å
α=90.00, β=90.00, γ=90.00 
Solvent content
 
Matthews coefficient
 

Refinement

Data for the highest resolution shell is in parentheses.
Resolution range
29.49-2.13Å (2.18-2.13Å)  
Rall(%)
16.1 
Rwork(%)
16.0 (18.9) 
Rfree(%)
20.7 (24.6) 
Num. observed reflections
100039 (6547) 
Num. Rfree reflections
1920 (126) 
Completeness(%)
95.0 (85.0) 

Model parameters

Num Atoms
14450  
Num Waters
1228  
Num Hetatoms
1250  
Model mean isotropic B factor
36.960Å2  
RMSD bond length
0.007Å  
RMSD bond angle
0.795°  
RMSD dihedral angle
17.426°
 
Filename uploaded
6won.pdb (uploaded on May 13, 2020 8:21 AM)  
Inserted
Apr 25, 2020